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  • Digital Humanities and Cultural Heritage
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  • Authors: Plutniak, Sébastien; Araujo, Renata; Coltofean, Laura; Delsol, Nicolas; +2 Authors

    An R 'Shiny' application for the visualisation, interactive exploration, and web communication of archaeological spatial data. It includes interactive 3D and 2D visualisations, generation of cross sections and maps of the remains, and display an interactive timeline of the work made in a site. Simple spatial statistics can be performed (convex hull, regression surfaces, 2D kernel density estimation), as well as exporting data to other online applications for more complex methods. 'archeoViz' can be used locally or deployed on a server, either with interactive input of data or with a static data set. Example is provided at https://analytics.huma-num.fr/archeoviz/en.

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  • Authors: Michaud, Geneviève; Agren, Quentin; Rouxel, Baptiste; Villette, Tom; +4 Authors
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/

    A toolkit for absolute and relative dating and analysis of chronological patterns. This package includes functions for chronological modeling and dating of archaeological assemblages from count data. It provides methods for matrix seriation. It also allows to compute time point estimates and density estimates of the occupation and duration of an archaeological site. To cite package "kairos" in publications use:

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/

    Datasets for teaching quantitative approaches and modeling in archaeology and paleontology. This package provides several types of data related to broad topics (cultural evolution, radiocarbon dating, paleoenvironments, etc.), which can be used to illustrate statistical methods in the classroom (multivariate data analysis, compositional data analysis, diversity measurement, etc.). To cite package "folio" in publications use:

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Software . 2021
    Data sources: ZENODO
    ZENODO
    Software . 2021
    Data sources: ZENODO
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Software . 2021
      Data sources: ZENODO
      ZENODO
      Software . 2021
      Data sources: ZENODO
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  • Authors: Michaud, Geneviève; Epee, Lothaire; Lemaître-Salmon, Malaury; Rouxel, Baptiste; +6 Authors

    WPSS stands for Web Panel Sample Service. It is a web application paired with the Qualtrics survey platform to meet the specific needs of high quality cross-national web surveys. WPSS enables: - a centralised management of survey fielding orchestration (publishing, sending invites and reminders), - and decentralised and privacy-compliant handling of panelist data. WPSS has been specified and developped within the framework of SSHOC, the Social Sciences and Humanities Open Cloud H2020, as part of the Work Package "Innovations in data production", led by ESS-ERIC. The software was developped by the CDSP's IT team at Sciences Po. Use cases can be found in the Social Sciences and Humanities but may extend to broader contexts as well. From October 2021 to June 2023, WPSS supports its first full-scale use case, within the frame of the European Social Survey for the web panel spinoff of ESS round 10, "Opinion Survey for (Country) "also known as the CRONOS-2 project.

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    Authors: Frerebeau, Nicolas; Lebrun, Brice;

    This work received a state financial support managed by the Agence Nationale de la Recherche (France) throught the program Investissements d'avenir (ref. 10-LABX-0052 and 11-IDEX-0001). A collection of 'shiny' applications for the R package 'gamma'.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Software . 2020
    Data sources: ZENODO
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: de Navascués, Miguel; Vitalis, Renaud;

    DriftTest is a computer program whose purpose is to is to detect loci under selection based on changes in allele frequencies between two time samples of the same population. Based on TempoDiff (DOI: 10.5281/zenodo.375600) it is modified to take into account partial selfing reproduction. If you use this software, please cite it as below.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Software . 2023
    Data sources: Datacite
    ZENODO
    Software . 2023
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    ZENODO
    Software . 2020
    Data sources: ZENODO
    ZENODO
    Software . 2018
    Data sources: ZENODO
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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      ZENODO
      Software . 2023
      Data sources: Datacite
      ZENODO
      Software . 2023
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      ZENODO
      Software . 2020
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      ZENODO
      Software . 2018
      Data sources: ZENODO
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  • Authors: Bey, Arnaud; Guillou, Patrick; Hatier, Sylvain; Garcia-Fernandez, Anne; +1 Authors

    TACT is a software developed within the UMR Litt&Arts (Grenoble Alpes University) which is mainly based on Symfony 4. It offers the possibility to host different transcription and annotation projects of digitized sources, each one having its own specificities (more or less open community, simple transcription or annotation according to a scheme, number of necessary reviews, etc.). This makes it possible to delegate transcription to non-specialists, while controlling the quality of the execution, through an easy-to-use interface.; TACT est un logiciel développé au sein de l'UMR Litt&Arts (Université Grenoble Alpes) qui s'appuie principalement sur Symfony 4. Il offre notamment la possibilité d'héberger différents projets de transcription et d’annotation de sources numérisées, chacun pouvant avoir ses spécificités (communauté plus ou moins ouverte, simple transcription ou annotation selon un schéma, nombre de relectures nécessaires, etc.). Cela permet de déléguer la transcription à des non-spécialistes, tout en contrôlant la qualité de l’exécution, et ce via une interface simple d’utilisation.

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  • Authors: Plutniak, Sébastien; Araujo, Renata; Coltofean, Laura; Delsol, Nicolas; +2 Authors

    An R 'Shiny' application for the visualisation, interactive exploration, and web communication of archaeological spatial data. It includes interactive 3D and 2D visualisations, generation of cross sections and maps of the remains, and display an interactive timeline of the work made in a site. Simple spatial statistics can be performed (convex hull, regression surfaces, 2D kernel density estimation), as well as exporting data to other online applications for more complex methods. 'archeoViz' can be used locally or deployed on a server, either with interactive input of data or with a static data set. Example is provided at https://analytics.huma-num.fr/archeoviz/en.

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  • Authors: Michaud, Geneviève; Agren, Quentin; Rouxel, Baptiste; Villette, Tom; +4 Authors
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    A toolkit for absolute and relative dating and analysis of chronological patterns. This package includes functions for chronological modeling and dating of archaeological assemblages from count data. It provides methods for matrix seriation. It also allows to compute time point estimates and density estimates of the occupation and duration of an archaeological site. To cite package "kairos" in publications use:

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Datasets for teaching quantitative approaches and modeling in archaeology and paleontology. This package provides several types of data related to broad topics (cultural evolution, radiocarbon dating, paleoenvironments, etc.), which can be used to illustrate statistical methods in the classroom (multivariate data analysis, compositional data analysis, diversity measurement, etc.). To cite package "folio" in publications use:

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  • Authors: Michaud, Geneviève; Epee, Lothaire; Lemaître-Salmon, Malaury; Rouxel, Baptiste; +6 Authors

    WPSS stands for Web Panel Sample Service. It is a web application paired with the Qualtrics survey platform to meet the specific needs of high quality cross-national web surveys. WPSS enables: - a centralised management of survey fielding orchestration (publishing, sending invites and reminders), - and decentralised and privacy-compliant handling of panelist data. WPSS has been specified and developped within the framework of SSHOC, the Social Sciences and Humanities Open Cloud H2020, as part of the Work Package "Innovations in data production", led by ESS-ERIC. The software was developped by the CDSP's IT team at Sciences Po. Use cases can be found in the Social Sciences and Humanities but may extend to broader contexts as well. From October 2021 to June 2023, WPSS supports its first full-scale use case, within the frame of the European Social Survey for the web panel spinoff of ESS round 10, "Opinion Survey for (Country) "also known as the CRONOS-2 project.

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    Authors: Frerebeau, Nicolas; Lebrun, Brice;

    This work received a state financial support managed by the Agence Nationale de la Recherche (France) throught the program Investissements d'avenir (ref. 10-LABX-0052 and 11-IDEX-0001). A collection of 'shiny' applications for the R package 'gamma'.

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    Authors: de Navascués, Miguel; Vitalis, Renaud;

    DriftTest is a computer program whose purpose is to is to detect loci under selection based on changes in allele frequencies between two time samples of the same population. Based on TempoDiff (DOI: 10.5281/zenodo.375600) it is modified to take into account partial selfing reproduction. If you use this software, please cite it as below.

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  • Authors: Bey, Arnaud; Guillou, Patrick; Hatier, Sylvain; Garcia-Fernandez, Anne; +1 Authors

    TACT is a software developed within the UMR Litt&Arts (Grenoble Alpes University) which is mainly based on Symfony 4. It offers the possibility to host different transcription and annotation projects of digitized sources, each one having its own specificities (more or less open community, simple transcription or annotation according to a scheme, number of necessary reviews, etc.). This makes it possible to delegate transcription to non-specialists, while controlling the quality of the execution, through an easy-to-use interface.; TACT est un logiciel développé au sein de l'UMR Litt&Arts (Université Grenoble Alpes) qui s'appuie principalement sur Symfony 4. Il offre notamment la possibilité d'héberger différents projets de transcription et d’annotation de sources numérisées, chacun pouvant avoir ses spécificités (communauté plus ou moins ouverte, simple transcription ou annotation selon un schéma, nombre de relectures nécessaires, etc.). Cela permet de déléguer la transcription à des non-spécialistes, tout en contrôlant la qualité de l’exécution, et ce via une interface simple d’utilisation.

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