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  • Digital Humanities and Cultural Heritage
  • 2018-2022
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  • gCube Ckan metadata publisher widget is a GWT Widget that allows to publish metadata on the d4science ckan data catalogue. Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: External Url files are properly managed as resources Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

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  • Authors: Harrop, Mitchell;

    Current version: v1.0.1 A collection of examples using the Victorian Heritage Database API. For more information see the Heritage Council of Victoria section of the GLAM Workbench. Notebook topics Introduction to the Victorian Heritage Database API This repository is part of the GLAM Workbench.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Luigi Fortunati; Ciro Formisano; Fabio Sinibaldi;

    Contains a GCube Registry descriptor implementation that recovers Registry endpoint through GCube IS service. Documentation All needed information are available in Installation page Installation Installation and usage example https://wiki.gcube-system.org/gcube/index.php/GCube_SDMX_Statistical_Data_Dissemination_System Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: Based on the new version of registry client Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/

    gCube VRE Deploy Wizard Portlet. Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: Feature #5729, send email to infraManagers upon new VRE cretions Task #10052, send email to infraManagers upon new VRE cretions Feature #6315, remove the mandatory node in creation phase Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Danks, Nicholas;

    SEMinR allows researchers to easily create, estimate, and visualize structural equation models (SEMs) for multiple estimation methods. SEMs are popular modeling techniques in social sciences and the life sciences, and can estimate relationships between concepts that need to be measured by multiple items. SEMinR can estimate SEMs using either covariance-based SEM (CBSEM, such as found in LISREL and Lavaan), or Partial Least Squares Path Modeling (PLS-PM, such as found in SmartPLS, semPLS, plspm, and csem). Moreover, SEMinR implements several advances in SEM methodologies not found elsewhere. And it also allows for visualization of all kinds of SEM models. SEMinR?s model description syntax is plain-old-R-functions (PORF!), which allows users to extend and compose syntax in novel ways. Thus, SEMinR is a one-stop-shop for both SEM practitioners seeking to analyze empirical models and SEM methodologists seeking to automate and extend SEM methods. SEMinR is increasingly being used in universities, for both research and teaching needs, and companies world-wide.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Frerebeau, Nicolas; Lebrun, Brice;

    This work received a state financial support managed by the Agence Nationale de la Recherche (France) throught the program Investissements d'avenir (ref. 10-LABX-0052 and 11-IDEX-0001). A collection of 'shiny' applications for the R package 'gamma'.

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    Software . 2020
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  • Authors: Orengo Romeu, Hèctor A.;

    JavaScript code to be implemented in Google Earth Engine(c) for large-scale, multi-temporal remote sensing of palaeo-river networks. This research presents a seasonal multi-temporal approach to the detection of palaeo-rivers over large areas based on long-term vegetation dynamics and spectral decomposition techniques. Twenty-eight years of Landsat 5 data, a total of 1711 multi-spectral images, have been bulk processed using Google Earth Engine© Code Editor and cloud computing infrastructure. The research presented has been carried out as part of the TwoRains projectt, which is a multi-disciplinary investigation of climate change and the Indus civilization in northwest India.

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    Authors: Tobias Hey; Fei Chen; Sebastian Weigelt; Walter F. Tichy;

    This is the supplementary material of the paper "Improving Traceability Link Recovery Using Fine-grained Requirements-to-Code Relations". In this paper, we explore the performance of word embedding-based fine-grained requirements-to-code relations in automated traceability link recovery. The repository includes the code as well as the datasets used. To fully enable the potential of a word embedding based approach, we translated the identifier in two datasets (SMOS and eTour) to match the prevalent language. Attribution (of datasets used): The original SMOS and eAnci datasets can be attributed to Gethers et al., On integrating orthogonal information retrieval methods to improve traceability recovery. In 2011 27th IEEE International Conference on Software Maintenance (ICSM), Sep. 2011. Available: https://doi.org/10.1109/ICSM.2011.6080780 The original eTour dataset was provided for the TEFSE challenge at 6th International Workshop on Traceability in Emerging Forms of Software Engineering (TEFSE), 2011 and was retrieved from http://coest.org/

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    ZENODO
    Software . 2021
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    Authors: He, Oliver;

    Ontology-based systematic representation and analysis of drug adverse events and its usage in study of adverse events given different patient age and disease conditions.

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    bio.tools
    Software . 2019
    License: Unlicense
    Data sources: bio.tools
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      Software . 2019
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    Authors: Xu, Tingjun; Weiming Chen; Junhong Zhou; Jingfang Dai; +2 Authors

    Additional file 3: Python code for LSTM model.

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    Software . 2020
    License: CC BY
    Data sources: Datacite
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    Data sources: Datacite
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    Software . 2020
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    Software . 2020
    License: CC BY
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  • gCube Ckan metadata publisher widget is a GWT Widget that allows to publish metadata on the d4science ckan data catalogue. Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: External Url files are properly managed as resources Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

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  • Authors: Harrop, Mitchell;

    Current version: v1.0.1 A collection of examples using the Victorian Heritage Database API. For more information see the Heritage Council of Victoria section of the GLAM Workbench. Notebook topics Introduction to the Victorian Heritage Database API This repository is part of the GLAM Workbench.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Luigi Fortunati; Ciro Formisano; Fabio Sinibaldi;

    Contains a GCube Registry descriptor implementation that recovers Registry endpoint through GCube IS service. Documentation All needed information are available in Installation page Installation Installation and usage example https://wiki.gcube-system.org/gcube/index.php/GCube_SDMX_Statistical_Data_Dissemination_System Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: Based on the new version of registry client Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/

    gCube VRE Deploy Wizard Portlet. Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: Feature #5729, send email to infraManagers upon new VRE cretions Task #10052, send email to infraManagers upon new VRE cretions Feature #6315, remove the mandatory node in creation phase Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Danks, Nicholas;

    SEMinR allows researchers to easily create, estimate, and visualize structural equation models (SEMs) for multiple estimation methods. SEMs are popular modeling techniques in social sciences and the life sciences, and can estimate relationships between concepts that need to be measured by multiple items. SEMinR can estimate SEMs using either covariance-based SEM (CBSEM, such as found in LISREL and Lavaan), or Partial Least Squares Path Modeling (PLS-PM, such as found in SmartPLS, semPLS, plspm, and csem). Moreover, SEMinR implements several advances in SEM methodologies not found elsewhere. And it also allows for visualization of all kinds of SEM models. SEMinR?s model description syntax is plain-old-R-functions (PORF!), which allows users to extend and compose syntax in novel ways. Thus, SEMinR is a one-stop-shop for both SEM practitioners seeking to analyze empirical models and SEM methodologists seeking to automate and extend SEM methods. SEMinR is increasingly being used in universities, for both research and teaching needs, and companies world-wide.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Frerebeau, Nicolas; Lebrun, Brice;

    This work received a state financial support managed by the Agence Nationale de la Recherche (France) throught the program Investissements d'avenir (ref. 10-LABX-0052 and 11-IDEX-0001). A collection of 'shiny' applications for the R package 'gamma'.

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  • Authors: Orengo Romeu, Hèctor A.;

    JavaScript code to be implemented in Google Earth Engine(c) for large-scale, multi-temporal remote sensing of palaeo-river networks. This research presents a seasonal multi-temporal approach to the detection of palaeo-rivers over large areas based on long-term vegetation dynamics and spectral decomposition techniques. Twenty-eight years of Landsat 5 data, a total of 1711 multi-spectral images, have been bulk processed using Google Earth Engine© Code Editor and cloud computing infrastructure. The research presented has been carried out as part of the TwoRains projectt, which is a multi-disciplinary investigation of climate change and the Indus civilization in northwest India.

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    Authors: Tobias Hey; Fei Chen; Sebastian Weigelt; Walter F. Tichy;

    This is the supplementary material of the paper "Improving Traceability Link Recovery Using Fine-grained Requirements-to-Code Relations". In this paper, we explore the performance of word embedding-based fine-grained requirements-to-code relations in automated traceability link recovery. The repository includes the code as well as the datasets used. To fully enable the potential of a word embedding based approach, we translated the identifier in two datasets (SMOS and eTour) to match the prevalent language. Attribution (of datasets used): The original SMOS and eAnci datasets can be attributed to Gethers et al., On integrating orthogonal information retrieval methods to improve traceability recovery. In 2011 27th IEEE International Conference on Software Maintenance (ICSM), Sep. 2011. Available: https://doi.org/10.1109/ICSM.2011.6080780 The original eTour dataset was provided for the TEFSE challenge at 6th International Workshop on Traceability in Emerging Forms of Software Engineering (TEFSE), 2011 and was retrieved from http://coest.org/

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    Authors: He, Oliver;

    Ontology-based systematic representation and analysis of drug adverse events and its usage in study of adverse events given different patient age and disease conditions.

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    bio.tools
    Software . 2019
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      Software . 2019
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    Authors: Xu, Tingjun; Weiming Chen; Junhong Zhou; Jingfang Dai; +2 Authors

    Additional file 3: Python code for LSTM model.

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