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310 research outcomes, page 1 of 31
  • publication . Article . 2020
    Open Access
    Authors:
    Rui Xing; Jie Luo; Tengwei Song;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    <jats:title>Abstract</jats:title><jats:sec> <jats:title>Background</jats:title> <jats:p>Although biomedical publications and literature are growing rapidly, there still lacks structured knowledge that can be easily processed by computer programs. In order to extract suc...

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  • publication . Article . 2020
    Open Access
    Authors:
    Jenna Kanerva; Filip Ginter; Sampo Pyysalo;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    <jats:title>Abstract</jats:title><jats:sec> <jats:title>Background: </jats:title> <jats:p>Syntactic analysis, or parsing, is a key task in natural language processing and a required component for many text mining approaches. In recent years, Universal Dependencies (UD) ...

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  • publication . Article . Other literature type . 2020
    Open Access
    Authors:
    Yuanhe Tian; Wang Shen; Yan Song; Fei Xia; Min He; Kenli Li;
    Publisher: Springer Science and Business Media LLC

    <jats:title>Abstract</jats:title><jats:sec><jats:title>Background</jats:title><jats:p>Biomedical named entity recognition (BioNER) is an important task for understanding biomedical texts, which can be challenging due to the lack of large-scale labeled training data and ...

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  • publication . Article . 2020
    Open Access English
    Authors:
    Jaehyun Lee; Doheon Lee; Kwang Hyung Lee;
    Persistent Identifiers
    Publisher: BioMed Central

    <jats:sec> <jats:title>Abstract</jats:title> <jats:p>Biological contextual information helps understand various phenomena occurring in the biological systems consisting of complex molecular relations. The construction of context-specific relational resources vastly reli...

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  • publication . Article . 2020
    Open Access English
    Authors:
    Alfonso Urso; Antonino Fiannaca; Massimo La Rosa; Laura La Paglia; Giosuè Lo Bosco; Riccardo Rizzo;
    Persistent Identifiers
    Publisher: BioMed Central Ltd

    <jats:title>Abstract</jats:title><jats:p>The 16th Annual Meeting of the Bioinformatics Italian Society was held in Palermo, Italy, on June 26-28, 2019. More than 80 scientific contributions were presented, including 4 keynote lectures, 31 oral communications and 49 post...

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  • publication . Article . Other literature type . 2020
    Open Access English
    Authors:
    Anders Svensson; Dorthe Dahl-Jensen; Jørgen Peder Steffensen; Thomas Blunier; Sune O. Rasmussen; Bo M. Vinther; Paul Vallelonga; Emilie Capron; Vasileios Gkinis; Eliza Cook; ...
    Publisher: Copernicus Publications
    Project: NSF | Collaborative Research: I... (1142166), SNSF | EURODIVERSITY 2005 FP083-... (20ED21-114216), EC | TiPES (820970), EC | THERA (820047), NSF | Collaborative Research: I... (0839093)

    <p><span id="page1566"/>The last glacial period is characterized by a number of millennial climate events that have been identified in both Greenland and Antarctic ice cores and that are abrupt in Greenland climate records. The mechanisms governing this climate variabil...

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  • publication . Article . 2020
    Open Access
    Authors:
    Di Zhao; Jian Wang; Yijia Zhang; Xin Wang; Hongfei Lin; Zhihao Yang;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    Abstract Background Most biomedical information extraction focuses on binary relations within single sentences. However, extracting n-ary relations that span multiple sentences is in huge demand. At present, in the cross-sentence n-ary relation extraction task, the main...

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  • publication . Other literature type . Article . 2020
    Open Access
    Authors:
    Luo, Zhi-Hui; Shi, Meng-Wei; Yang, Zhuang; Zhang, Hong-Yu; Chen, Zhen-Xia;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    Abstract Background Many disease causing genes have been identified through different methods, but there have been no uniform annotations of biomedical named entity (bio-NE) of the disease phenotypes of these genes yet. Furthermore, semantic similarity comparison betwee...

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  • publication . Article . 2020
    Open Access
    Authors:
    Tong Wang; Ping Xuan; Zonglin Liu; Tiangang Zhang;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    Abstract Background Inferring diseases related to the patient’s electronic medical records (EMRs) is of great significance for assisting doctor diagnosis. Several recent prediction methods have shown that deep learning-based methods can learn the deep and complex inform...

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  • publication . Article . Other literature type . 2020
    Open Access English
    Authors:
    Kilicoglu, Halil; Rosemblat, Graciela; Fiszman, Marcelo; Shin, Dongwook;
    Persistent Identifiers
    Publisher: BioMed Central

    Abstract Background In the era of information overload, natural language processing (NLP) techniques are increasingly needed to support advanced biomedical information management and discovery applications. In this paper, we present an in-depth description of SemRep, an...

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310 research outcomes, page 1 of 31