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301 research outcomes, page 1 of 31
  • publication . Preprint . Article . Other literature type . 2021
    Open Access English
    Authors:
    Samuel Martin; Richard M. Leggett;
    Publisher: Cold Spring Harbor Laboratory

    Abstract Background The analysis of long reads or the assessment of assembly or target capture data often necessitates running alignments against reference genomes or gene sets. The aligner outputs are often parsed automatically by scripts, but many kinds of analysis ca...

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  • publication . Article . 2020
    Open Access English
    Authors:
    Jaehyun Lee; Doheon Lee; Kwang Hyung Lee;
    Persistent Identifiers
    Publisher: BioMed Central

    <jats:sec> <jats:title>Abstract</jats:title> <jats:p>Biological contextual information helps understand various phenomena occurring in the biological systems consisting of complex molecular relations. The construction of context-specific relational resources vastly reli...

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  • publication . Article . 2020
    Open Access
    Authors:
    Alfonso Urso; Antonino Fiannaca; Massimo La Rosa; Laura La Paglia; Giosuè Lo Bosco; Riccardo Rizzo;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    <jats:title>Abstract</jats:title> <jats:p>The 16th Annual Meeting of the Bioinformatics Italian Society was held in Palermo, Italy, on June 26-28, 2019. More than 80 scientific contributions were presented, including 4 keynote lectures, 31 oral communications and 49 pos...

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  • publication . Other literature type . Article . Preprint . 2020
    Open Access English
    Authors:
    A. Svensson; D. Dahl-Jensen; J. P. Steffensen; T. Blunier; S. O. Rasmussen; B. M. Vinther; P. Vallelonga; P. Vallelonga; E. Capron; V. Gkinis; ...
    Project: SNSF | EURODIVERSITY 2005 FP083-... (20ED21-114216), NSF | Collaborative Research: I... (1142166)

    <p><span id="page1566"/>The last glacial period is characterized by a number of millennial climate events that have been identified in both Greenland and Antarctic ice cores and that are abrupt in Greenland climate records. The mechanisms governing this climate variabil...

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  • publication . Article . 2020
    Open Access
    Authors:
    Di Zhao; Jian Wang; Yijia Zhang; Xin Wang; Hongfei Lin; Zhihao Yang;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    Abstract Background Most biomedical information extraction focuses on binary relations within single sentences. However, extracting n-ary relations that span multiple sentences is in huge demand. At present, in the cross-sentence n-ary relation extraction task, the main...

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  • publication . Article . 2020
    Open Access English
    Authors:
    Tong Wang; Ping Xuan; Zonglin Liu; Tiangang Zhang;
    Persistent Identifiers
    Publisher: BMC

    Abstract Background Inferring diseases related to the patient’s electronic medical records (EMRs) is of great significance for assisting doctor diagnosis. Several recent prediction methods have shown that deep learning-based methods can learn the deep and complex inform...

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  • publication . Other literature type . Article . 2020
    Open Access
    Authors:
    Zhi-Hui Luo; Meng-Wei Shi; Zhuang Yang; Hong-Yu Zhang; Zhen-Xia Chen;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    Abstract Background Many disease causing genes have been identified through different methods, but there have been no uniform annotations of biomedical named entity (bio-NE) of the disease phenotypes of these genes yet. Furthermore, semantic similarity comparison betwee...

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  • publication . Preprint . 2020
    Open Access
    Authors:
    Michael Ghil;
    Persistent Identifiers
    Publisher: Copernicus GmbH
    Project: EC | TiPES (820970)

    <jats:p>&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Abstract.&amp;lt;/strong&amp;gt; The scientific problems posed by the Earth's atmosphere, oceans, cryosphere &amp;amp;#8211; along with the land surface and biota that interact with them &amp;amp;#8211; are central to major...

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  • publication . Other literature type . Article . 2020
    Open Access
    Authors:
    Halil Kilicoglu; Graciela Rosemblat; Marcelo Fiszman; Dongwook Shin;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    Abstract Background In the era of information overload, natural language processing (NLP) techniques are increasingly needed to support advanced biomedical information management and discovery applications. In this paper, we present an in-depth description of SemRep, an...

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  • publication . Article . 2020
    Open Access English
    Authors:
    Li Zhijing; Yuchen Lian; Ma Xiaoyong; Xiangrong Zhang; Chen Li;
    Persistent Identifiers
    Publisher: BMC

    Abstract Background Semantic resources such as knowledge bases contains high-quality-structured knowledge and therefore require significant effort from domain experts. Using the resources to reinforce the information retrieval from the unstructured text may further expl...

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301 research outcomes, page 1 of 31