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22 research outcomes, page 1 of 3
  • publication . Article . Conference object . Preprint . Contribution for newspaper or weekly magazine . Other literature type . 2020 . Embargo End Date: 10 Jul 2020
    Open Access
    Authors:
    Biao Zhang; Philip Williams; Ivan Titov; Rico Sennrich;
    Publisher: Association for Computational Linguistics
    Project: SNSF | Multi-Task Learning with ... (PP00P1_176727), EC | GoURMET (825299), EC | ELITR (825460)

    Comment: ACL2020

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  • publication . Other literature type . Article . Preprint . 2019
    Open Access
    Authors:
    Jettakul, Amarin; Wichadakul, Duangdao; Vateekul, Peerapon;
    Publisher: bioRxiv

    <jats:title>Abstract</jats:title><jats:sec> <jats:title>Background</jats:title> <jats:p>The Bacteria Biotope (BB) task is a biomedical relation extraction (RE) that aims to study the interaction between bacteria and their locations. This task is considered to pertain to...

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  • publication . Article . Other literature type . Preprint . 2019
    Open Access English
    Authors:
    Samuel Martin; Richard Leggett;
    Publisher: BMC

    <jats:title>Abstract</jats:title><jats:sec> <jats:title>Background</jats:title> <jats:p>The analysis of long reads or the assessment of assembly or target capture data often necessitates running alignments against reference genomes or gene sets. The aligner outputs are ...

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  • publication . Article . Other literature type . Preprint . 2019
    Open Access English
    Authors:
    Stanke, Mario; Bruhn, Willy; Becker, Felix; Hoff, Katharina J.;
    Publisher: BMC
    Project: NIH | Addressing Open Challenge... (1R01GM128145-01)

    <jats:title>Abstract</jats:title> <jats:sec> <jats:title>Background</jats:title> <jats:p>Vast amounts of next generation sequencing RNA data has been deposited in archives, accompanying very diverse original studies. The data is readily available also for other purposes...

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  • publication . Other literature type . Article . Preprint . 2019 . Embargo End Date: 01 Apr 2019
    Open Access
    Authors:
    Sheikhalishahi, Seyedmostafa; Miotto, Riccardo; Dudley, Joel T; Lavelli, Alberto; Rinaldi, Fabio; Osmani, Venet;
    Publisher: JMIR Publications
    Project: EC | WellCO (769765)

    Of the 2652 articles considered, 106 met the inclusion criteria. Review of the included papers resulted in identification of 43 chronic diseases, which were then further classified into 10 disease categories using ICD-10. The majority of studies focused on diseases of t...

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  • publication . Other literature type . Article . Preprint . 2019
    Open Access
    Authors:
    Nguyen, Dat Quoc; Verspoor, Karin;
    Persistent Identifiers
    Publisher: Springer Science and Business Media LLC

    Background: Given the importance of relation or event extraction from biomedical research publications to support knowledge capture and synthesis, and the strong dependency of approaches to this information extraction task on syntactic information, it is valuable to und...

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  • publication . Conference object . Other literature type . Preprint . Article . 2018
    Open Access
    Authors:
    Miculicich Werlen, Lesly; Ram, Dhananjay; Pappas, Nikolaos; Henderson, James;
    Project: EC | SUMMA (688139)

    Neural Machine Translation (NMT) can be improved by including document-level contextual information. For this purpose, we propose a hierarchical attention model to capture the context in a structured and dynamic manner. The model is integrated in the original NMT archit...

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  • publication . Preprint . Other literature type . Article . 2018
    Open Access English
    Authors:
    Dotter, Aaron; Milone, Antonino P.; Conroy, Charlie; Marino, Anna F.; Sarajedini, Ata;
    Persistent Identifiers
    Project: EC | GALFOR (716082)

    Galactic globular clusters (GCs) show overwhelming photometric and spectroscopic evidence for the existence of multiple stellar populations. The question of whether or not there exists a GC that represents a true 'simple stellar population' remains open. Here we focus o...

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  • publication . Conference object . Preprint . 2018
    Open Access
    Authors:
    Hardy Hardy; Andreas Vlachos;
    Persistent Identifiers
    Publisher: Association for Computational Linguistics
    Project: EC | SUMMA (688139)

    Recent work on abstractive summarization has made progress with neural encoder-decoder architectures. However, such models are often challenged due to their lack of explicit semantic modeling of the source document and its summary. In this paper, we extend previous work...

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  • publication . Conference object . Other literature type . Contribution for newspaper or weekly magazine . Preprint . 2018
    Open Access English
    Authors:
    Rachel Bawden; Rico Sennrich; Alexandra Birch; Barry Haddow;
    Publisher: HAL CCSD
    Project: EC | SUMMA (688139), SNSF | Dating structural fabric ... (200020-105212), SNSF | Rich Context in Neural Ma... (10521F_169888), EC | TraMOOC (644333), EC | HimL (644402)

    Comment: Final version of paper to appear in Proceedings of NAACL 2018

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22 research outcomes, page 1 of 3