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Research data keyboard_double_arrow_right Dataset 2018Embargo end date: 13 Mar 2018 Spain EnglishPublisher:Dryad Funded by:EC | 100 Archaic Genomes, ARC | Australian Laureate Fello..., ARC | ARC Future Fellowships - ... +1 projectsEC| 100 Archaic Genomes ,ARC| Australian Laureate Fellowships - Grant ID: FL130100116 ,ARC| ARC Future Fellowships - Grant ID: FT140100384 ,ARC| ARC Future Fellowships - Grant ID: FT150100138Slon, Viviane; Hopfe, Charlotte; Weiss, Clemens L.; Mafessoni, Fabrizio; de la Rasilla, Marco; Lalueza-Fox, Carles;doi: 10.5061/dryad.m2dk7
handle: 10261/278288
Although a rich record of Pleistocene human-associated archaeological assemblages exists, the scarcity of hominin fossils often impedes the understanding of which hominins occupied a site. Using targeted enrichment of mitochondrial DNA we show that cave sediments represent a rich source of ancient mammalian DNA that often includes traces of hominin DNA, even at sites and in layers where no hominin remains have been discovered. By automation-assisted screening of numerous sediment samples we detect Neandertal DNA in eight archaeological layers from four caves in Eurasia. In Denisova Cave we retrieved Denisovan DNA in a Middle Pleistocene layer near the bottom of the stratigraphy. Our work opens the possibility to detect the presence of hominin groups at sites and in areas where no skeletal remains are found. Multiple sequence alignment files This submission contains multiple sequence alignment files used for phylogenetic reconstructions. Sequences reconstructed from sediments are denominated by the site and layer of origin. The comparative data (identical in all files) is identified by the name of the individual and the accession code of its mtDNA sequence. MSA_sedimentDNA.zip Peer reviewed
DRYAD; ZENODO; NARCI... arrow_drop_down Recolector de Ciencia Abierta, RECOLECTA; DIGITAL.CSICDataset . 2022 . 2018 . Peer-reviewedadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.eu0 citations 0 popularity Average influence Average impulse Average Powered by BIP!visibility 33visibility views 33 download downloads 4 Powered bymore_vert DRYAD; ZENODO; NARCI... arrow_drop_down Recolector de Ciencia Abierta, RECOLECTA; DIGITAL.CSICDataset . 2022 . 2018 . Peer-reviewedadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5061/dryad.m2dk7&type=result"></script>'); --> </script>
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Research data keyboard_double_arrow_right Dataset 2018Embargo end date: 13 Mar 2018 Spain EnglishPublisher:Dryad Funded by:EC | 100 Archaic Genomes, ARC | Australian Laureate Fello..., ARC | ARC Future Fellowships - ... +1 projectsEC| 100 Archaic Genomes ,ARC| Australian Laureate Fellowships - Grant ID: FL130100116 ,ARC| ARC Future Fellowships - Grant ID: FT140100384 ,ARC| ARC Future Fellowships - Grant ID: FT150100138Slon, Viviane; Hopfe, Charlotte; Weiss, Clemens L.; Mafessoni, Fabrizio; de la Rasilla, Marco; Lalueza-Fox, Carles;doi: 10.5061/dryad.m2dk7
handle: 10261/278288
Although a rich record of Pleistocene human-associated archaeological assemblages exists, the scarcity of hominin fossils often impedes the understanding of which hominins occupied a site. Using targeted enrichment of mitochondrial DNA we show that cave sediments represent a rich source of ancient mammalian DNA that often includes traces of hominin DNA, even at sites and in layers where no hominin remains have been discovered. By automation-assisted screening of numerous sediment samples we detect Neandertal DNA in eight archaeological layers from four caves in Eurasia. In Denisova Cave we retrieved Denisovan DNA in a Middle Pleistocene layer near the bottom of the stratigraphy. Our work opens the possibility to detect the presence of hominin groups at sites and in areas where no skeletal remains are found. Multiple sequence alignment files This submission contains multiple sequence alignment files used for phylogenetic reconstructions. Sequences reconstructed from sediments are denominated by the site and layer of origin. The comparative data (identical in all files) is identified by the name of the individual and the accession code of its mtDNA sequence. MSA_sedimentDNA.zip Peer reviewed
DRYAD; ZENODO; NARCI... arrow_drop_down Recolector de Ciencia Abierta, RECOLECTA; DIGITAL.CSICDataset . 2022 . 2018 . Peer-reviewedadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5061/dryad.m2dk7&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu0 citations 0 popularity Average influence Average impulse Average Powered by BIP!visibility 33visibility views 33 download downloads 4 Powered bymore_vert DRYAD; ZENODO; NARCI... arrow_drop_down Recolector de Ciencia Abierta, RECOLECTA; DIGITAL.CSICDataset . 2022 . 2018 . Peer-reviewedadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5061/dryad.m2dk7&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu