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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Stultiens, Andrea;

    Reflection on the process towards and around the publication 'Ebifananyi VII, Staying Alive - documenting the Uganda Cancer Institute' by medical historian Marissa Mika

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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    NARCIS
    Other ORP type . 2017
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      Other ORP type . 2017
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    Authors: Ribbens, C.R.; de Boer, V.; van Doornik, J.; Buitinck, L.; +2 Authors
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    Authors: Stultiens, Andrea;

    Ebifananyi 4, based on the Ham Mukasa Foundation Archive that HIPUganda digitised, has had several exhibition versions. This one puts a strong emphasis on the works produced by Ugandan artists and Dutch and Ugandan art students for the project. In this other exhibition creating an opportunity to explore Mukasa’s stories through various images and objects was the lead. See this short film for thoughts on the translation of the title of Ham Mukasa’s book on the three Kings; Simuda Nyuma, and the Luganda word Ekifananyi by curator Robinah Nansubuga and Artist Nathan Omiel. Participating artists in this exhibition are Achola Rosario, Eria Nsubuga, Fred Mutebi, Ian Mwesiga, Lwanga Emmanuel, Nathan Omiel, Papa Shabani, Sanaa Gateja and Violet Nantume. The Ugandan students followed Eria Nsubuga’s painting course at Uganda Christian University in Mukono, while the Dutch students were part of an elective I taught under the name ‘Illustrating (for) others’ at Academy Minerva in Groningen.

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    Other ORP type . 2015
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      Other ORP type . 2015
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    Authors: van Zundert, Joris J.;

    Increasingly code and algorithms are techniques also applied in textual scholarship, giving rise to new interactions between software engineers and textual scholars. This book argues that much of that process and its effects on textual scholarship are still poorly understood and go unchecked by otherwise normal processes of quality control in scholarship such as peer review. The text provides case studies in which some of these interactions become more apparent, as well as the academic challenges and problems that they introduce. The book demonstrates that the space between code creation and conventional scholarship is one that offers many affordances to textual scholarship that until now remain unexplored. The author argues that it is an intellectual obligation of programmers and textual scholars to examine the properties of digital text and how its existence changes and challenges textual scholarship.

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    Authors: Dietz, A.J.;

    In this inaugural address the author, director of the African Studies Centre Leiden since 2010, first gives an impression of how Africans themselves perceive change and development, based on recent research in Ghana and Burkina Faso. He then presents some positive statistical evidence about Africa as a whole. After this, he sketches his current ideas for the future of the African Studies Centre in this era of an emerging Africa. [ASC Leiden abstract]

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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    NARCIS
    Lecture . 2011
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      Lecture . 2011
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Hagedoorn, Berber; van Gorp, Jasmijn; Keilbach, Judith; Müller, Eggo; +2 Authors
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    Other ORP type . 2018
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      Other ORP type . 2018
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    Authors: Leyssen, Mieke; Traub, Myriam; Ossenbruggen, Jacco; Hardman, Lynda;

    Cultural heritage institutes often make use of tags to facilitate searching their collections. While professionals associated with these institutes are able to add high quality descriptions to objects in the collections, both their time and their areas of expertise are limited. As a result, online tagging by non-professional users is more frequently becoming deployed to increase the number of tags. When these users are asked to tag objects in the collection, they can be confronted with tags submitted by other users. These tags may be of varying quality and present in differing numbers, both of which may influence users' tagging behavior. We report on a study on the impact of presenting different types of tags on the quality and quantity of tags added by users. We conclude that there is no difference in the quality and quantity of added tags in all experimental conditions, with the exception of the condition in which incorrect tags were presented. In this condition, the quality of the tags added by users decreased. We discuss the implications of these findings on the design of tagging interfaces.

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    Other ORP type . 2012
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      Other ORP type . 2012
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Philip Verhagen; Bjørn P. Bartholdy;

    This is part 4 of the Rchon statistics course. It continues the basics of statistical testing in R. In this tutorial, we will treat the following statistical testing methods: Mann-Whitney test Kruskal-Wallis test Kolmogorov-Smirnov test Follow the instructions in Instructions Tutorial 4.pdf to start the tutorial. This course was originally created for Archon Research School of Archaeology by Philip Verhagen (Vrije Universiteit Amsterdam) and Bjørn P. Bartholdy (University of Leiden), and consists of an instruction, a tutorial, a test and two datafiles. All content is CC BY-NC-SA: it can be freely distributed and modified under the condition of proper attribution and non-commercial use. How to cite: Verhagen, P. & B.P. Bartholdy, 2022. "Rchon statistics course, part 3". Amsterdam, ARCHON Research School of Archaeology. https://doi.org/10.5281/zenodo.7458108

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    InteractiveResource . 2022
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    Authors: van der Heijden, T.; Kuypers, Valentine;
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    Other ORP type . 2023
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      Other ORP type . 2023
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    Authors: Chatterjee, Avishek; Nardi, Cosimo; Oberije, Cary; Lambin, Philippe;

    Background: Searching through the COVID-19 research literature to gain actionable clinical insight is a formidable task, even for experts. The usefulness of this corpus in terms of improving patient care is tied to the ability to see the big picture that emerges when the studies are seen in conjunction rather than in isolation. When the answer to a search query requires linking together multiple pieces of information across documents, simple keyword searches are insufficient. To answer such complex information needs, an innovative artificial intelligence (AI) technology named a knowledge graph (KG) could prove to be effective. Methods: We conducted an exploratory literature review of KG applications in the context of COVID-19. The search term used was "covid-19 knowledge graph". In addition to PubMed, the first five pages of search results for Google Scholar and Google were considered for inclusion. Google Scholar was used to include non-peer-reviewed or non-indexed articles such as pre-prints and conference proceedings. Google was used to identify companies or consortiums active in this domain that have not published any literature, peer-reviewed or otherwise. Results: Our search yielded 34 results on PubMed and 50 results each on Google and Google Scholar. We found KGs being used for facilitating literature search, drug repurposing, clinical trial mapping, and risk factor analysis. Conclusions: Our synopses of these works make a compelling case for the utility of this nascent field of research.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Stultiens, Andrea;

    Reflection on the process towards and around the publication 'Ebifananyi VII, Staying Alive - documenting the Uganda Cancer Institute' by medical historian Marissa Mika

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    Other ORP type . 2017
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    Authors: Ribbens, C.R.; de Boer, V.; van Doornik, J.; Buitinck, L.; +2 Authors
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    Authors: Stultiens, Andrea;

    Ebifananyi 4, based on the Ham Mukasa Foundation Archive that HIPUganda digitised, has had several exhibition versions. This one puts a strong emphasis on the works produced by Ugandan artists and Dutch and Ugandan art students for the project. In this other exhibition creating an opportunity to explore Mukasa’s stories through various images and objects was the lead. See this short film for thoughts on the translation of the title of Ham Mukasa’s book on the three Kings; Simuda Nyuma, and the Luganda word Ekifananyi by curator Robinah Nansubuga and Artist Nathan Omiel. Participating artists in this exhibition are Achola Rosario, Eria Nsubuga, Fred Mutebi, Ian Mwesiga, Lwanga Emmanuel, Nathan Omiel, Papa Shabani, Sanaa Gateja and Violet Nantume. The Ugandan students followed Eria Nsubuga’s painting course at Uganda Christian University in Mukono, while the Dutch students were part of an elective I taught under the name ‘Illustrating (for) others’ at Academy Minerva in Groningen.

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    Authors: van Zundert, Joris J.;

    Increasingly code and algorithms are techniques also applied in textual scholarship, giving rise to new interactions between software engineers and textual scholars. This book argues that much of that process and its effects on textual scholarship are still poorly understood and go unchecked by otherwise normal processes of quality control in scholarship such as peer review. The text provides case studies in which some of these interactions become more apparent, as well as the academic challenges and problems that they introduce. The book demonstrates that the space between code creation and conventional scholarship is one that offers many affordances to textual scholarship that until now remain unexplored. The author argues that it is an intellectual obligation of programmers and textual scholars to examine the properties of digital text and how its existence changes and challenges textual scholarship.

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    Authors: Dietz, A.J.;

    In this inaugural address the author, director of the African Studies Centre Leiden since 2010, first gives an impression of how Africans themselves perceive change and development, based on recent research in Ghana and Burkina Faso. He then presents some positive statistical evidence about Africa as a whole. After this, he sketches his current ideas for the future of the African Studies Centre in this era of an emerging Africa. [ASC Leiden abstract]

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    Lecture . 2011
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    Authors: Hagedoorn, Berber; van Gorp, Jasmijn; Keilbach, Judith; Müller, Eggo; +2 Authors
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    Other ORP type . 2018
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    Authors: Leyssen, Mieke; Traub, Myriam; Ossenbruggen, Jacco; Hardman, Lynda;

    Cultural heritage institutes often make use of tags to facilitate searching their collections. While professionals associated with these institutes are able to add high quality descriptions to objects in the collections, both their time and their areas of expertise are limited. As a result, online tagging by non-professional users is more frequently becoming deployed to increase the number of tags. When these users are asked to tag objects in the collection, they can be confronted with tags submitted by other users. These tags may be of varying quality and present in differing numbers, both of which may influence users' tagging behavior. We report on a study on the impact of presenting different types of tags on the quality and quantity of tags added by users. We conclude that there is no difference in the quality and quantity of added tags in all experimental conditions, with the exception of the condition in which incorrect tags were presented. In this condition, the quality of the tags added by users decreased. We discuss the implications of these findings on the design of tagging interfaces.

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    Authors: Philip Verhagen; Bjørn P. Bartholdy;

    This is part 4 of the Rchon statistics course. It continues the basics of statistical testing in R. In this tutorial, we will treat the following statistical testing methods: Mann-Whitney test Kruskal-Wallis test Kolmogorov-Smirnov test Follow the instructions in Instructions Tutorial 4.pdf to start the tutorial. This course was originally created for Archon Research School of Archaeology by Philip Verhagen (Vrije Universiteit Amsterdam) and Bjørn P. Bartholdy (University of Leiden), and consists of an instruction, a tutorial, a test and two datafiles. All content is CC BY-NC-SA: it can be freely distributed and modified under the condition of proper attribution and non-commercial use. How to cite: Verhagen, P. & B.P. Bartholdy, 2022. "Rchon statistics course, part 3". Amsterdam, ARCHON Research School of Archaeology. https://doi.org/10.5281/zenodo.7458108

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    InteractiveResource . 2022
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    Authors: van der Heijden, T.; Kuypers, Valentine;
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Open University of t...arrow_drop_down
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Authors: Chatterjee, Avishek; Nardi, Cosimo; Oberije, Cary; Lambin, Philippe;

    Background: Searching through the COVID-19 research literature to gain actionable clinical insight is a formidable task, even for experts. The usefulness of this corpus in terms of improving patient care is tied to the ability to see the big picture that emerges when the studies are seen in conjunction rather than in isolation. When the answer to a search query requires linking together multiple pieces of information across documents, simple keyword searches are insufficient. To answer such complex information needs, an innovative artificial intelligence (AI) technology named a knowledge graph (KG) could prove to be effective. Methods: We conducted an exploratory literature review of KG applications in the context of COVID-19. The search term used was "covid-19 knowledge graph". In addition to PubMed, the first five pages of search results for Google Scholar and Google were considered for inclusion. Google Scholar was used to include non-peer-reviewed or non-indexed articles such as pre-prints and conference proceedings. Google was used to identify companies or consortiums active in this domain that have not published any literature, peer-reviewed or otherwise. Results: Our search yielded 34 results on PubMed and 50 results each on Google and Google Scholar. We found KGs being used for facilitating literature search, drug repurposing, clinical trial mapping, and risk factor analysis. Conclusions: Our synopses of these works make a compelling case for the utility of this nascent field of research.

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