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75 research outcomes, page 1 of 8
  • software . 2017
    Authors:
    Mika, Sven;
    Publisher: bio.tools

    NLProt is a tool for finding protein names in natural language text. This data-mining method is a useful approach for extracting protein UniprotIDs from research articles for the construction of custom datasets and/or databases.

  • software . 2017
    Perl
    Authors:
    Service, Web;
    Publisher: bio.tools

    Yeast MetaboliNER is a tool to automatically identify metabolite names in the literature, and associate structures where possible, to define the reported yeast metabolome.

  • software . 2019
    Open Source
    Authors:
    Lu, Zhiyong;
    Publisher: bio.tools

    Web-based application that provides computer-annotated biomedical concepts, such as genes and mutations, in PubMed citations and PMC full-text articles.

  • software . 2019
    Open Source
    Authors:
    Wu, Canglin;
    Publisher: bio.tools

    Restructured version of Gene Expression Omnibus (GEO) that provides a user friendly interface for curating GEO database

  • software . 2018
    Python
    Authors:
    Sorger, Peter K.;
    Publisher: bio.tools

    It is an effective resource for improving named entity recognition, grounding, and relationship resolution in automated reading of biomedical text.

  • software . 2016
    Authors:
    Cañada, Andrés; Krallinger, Martin; Krallinger, Martin; Cañada, Andrés;
    Publisher: bio.tools

    Text mining for melanoma.

  • software . 2018
    Authors:
    Support;
    Publisher: bio.tools

    Significantly improved text-mining system for discovering associations between human diseases, genes, drugs, metabolites, toxins and more.

  • software . 2020
    MATLAB
    Authors:
    Reyes-Aldasoro, Constantino Carlos;
    Publisher: bio.tools

    Visualisation and data mining of the public database of biomedical literature PubMed

  • software . 2015
    C++
    Authors:
    Stražar, Martin; Čopar, Andrej; Curk, Tomaž; Toplak, Marko; Žagar, Lan; Kernc, Jernej; Demšar, Janez; Tanko, Vesna; Erjavec, Aleš; Starič, Anže; ...
    Publisher: bio.tools

    Open source data visualization and analysis for novice and experts. Data mining through visual programming or Python scripting. Components for machine learning. Add-ons for bioinformatics and text mining. Packed with features for data analytics.

  • software . 2016
    Authors:
    Fontaine, Jean Fred;
    Publisher: bio.tools

    This web server offers a flexible and fast statistical ranking of PubMed abstracts for topics of interest without expert knowledge.

75 research outcomes, page 1 of 8