T Cell Relation Extraction (TCRE) - Extracting T Cell Function and Differentiation Characteristics from the Biomedical Literature.

WHOSe Heritage: Classification of UNESCO World Heritage "Outstanding Universal Value" Documents with Smoothed Labels This repository provides the supplemental materials for reproducing the results of the above-mentioned paper as submitted to arXiv preprint ser...

Interactive pathway modeling using natural language with automated assembly.

Tool for RNA–RNA interaction extraction from the literature.

Collaboration of deep neural networks for biomedical named entity recognition.

Literature-mined resource for drivers, oncogenes and tumor suppressors in cancer.

COMPARTMENTS is a weekly updated web resource that integrates evidence on protein subcellular localization from manually curated literature, high-throughput screens, automatic text mining, and sequence-based prediction methods. We map all evidence to common protein iden...

ProtTrans is providing state of the art pre-trained models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using various Transformers Models.

Biofactoid is a web-based system that empowers authors to capture and share machine-readable summaries of molecular-level interactions described in their publications.

Scripts for Virtuoso to create linked data from relational data, and for creating and using cultural heritage ontologies.