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  • Digital Humanities and Cultural Heritage
  • 2017-2021
  • Open Access
  • Netherlands Organisation for Scient...
  • Mémoires en Sciences de l'Informati...
  • Digital Humanities and Cultural Her...

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Karène Sanchez Summerer; Philippe Bourmaud; Séverine Gabry-Thienpont; Marie Levant; +1 Authors

    How was missionary knowledge received and interpreted by scholars and church historians in Europe and Russia? Many late nineteenth and early twentieth-century academics utilised knowledge production from Christian missions, notably by way of scholarly Orientalism. However, the history of this knowledge is also a history of representations: while missionary knowledge helped showcase the cultural and religious traditions of Eastern Christianity, what were the underlying motives and especially the consequences? This article examines the formulation and circulation of Eastern Christian knowledge on either side of the Mediterranean, especially on the basis of Catholic missionary archives and academic productions, the study of which is sometimes rooted in non-Anglophone academic traditions. The aim is to shed light on how knowledge relating to Eastern Christianity was assimilated in Europe, as well as the role missions played in this process, especially from the last third of the nineteenth century, when the institutions and instruments for the circulation of knowledge emerged. Another objective is to address the circulations and transformations of this knowledge on either side of the Mediterranean: collected and developed in major European libraries and universities, it was integrated by the governance structures of churches, but quite often also returned to the space it originated from, where it was reappropriated and gave rise to patrimonial processes, notably alongside the sometimes tragic experiences of certain communities during the end of the Ottoman Empire and the establishment of new states. Christian missions, at the intersection of East and West, were at the heart of this dynamic . International audience

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    Contemporary Levant
    Article
    License: CC BY
    Data sources: UnpayWall
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    Contemporary Levant
    Article . 2021 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Sathyanadh, Anusha; Monteil, Guillaume; Scholze, Marko; Klosterhalfen, Anne; +40 Authors

    The mid-Pliocene warm period (3.264–3.025 Ma) is the most recent geological period during which atmospheric CO2 levels were similar to recent historical values (∼400 ppm). Several proxy reconstructions for the mid-Pliocene show highly reduced zonal sea surface temperature (SST) gradients in the tropical Pacific Ocean, indicating an El Niño-like mean state. However, past modelling studies do not show these highly reduced gradients. Efforts to understand mid-Pliocene climate dynamics have led to the Pliocene Model Intercomparison Project (PlioMIP). Results from the first phase (PlioMIP1) showed clear El Niño variability (albeit significantly reduced) and did not show the greatly reduced time-mean zonal SST gradient suggested by some of the proxies. In this work, we study El Niño–Southern Oscillation (ENSO) variability in the PlioMIP2 ensemble, which consists of additional global coupled climate models and updated boundary conditions compared to PlioMIP1. We quantify ENSO amplitude, period, spatial structure and “flavour”, as well as the tropical Pacific annual mean state in mid-Pliocene and pre-industrial simulations. Results show a reduced ENSO amplitude in the model-ensemble mean (−24 %) with respect to the pre-industrial, with 15 out of 17 individual models showing such a reduction. Furthermore, the spectral power of this variability considerably decreases in the 3–4-year band. The spatial structure of the dominant empirical orthogonal function shows no particular change in the patterns of tropical Pacific variability in the model-ensemble mean, compared to the pre-industrial. Although the time-mean zonal SST gradient in the equatorial Pacific decreases for 14 out of 17 models (0.2 ∘C reduction in the ensemble mean), there does not seem to be a correlation with the decrease in ENSO amplitude. The models showing the most “El Niño-like” mean state changes show a similar ENSO amplitude to that in the pre-industrial reference, while models showing more “La Niña-like” mean state changes generally show a large reduction in ENSO variability. The PlioMIP2 results show a reasonable agreement with both time-mean proxies indicating a reduced zonal SST gradient and reconstructions indicating a reduced, or similar, ENSO variability. International audience

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    DOAJ
    Article . 2021
    Data sources: DOAJ
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    Climate of the Past (CP)
    Other literature type . 2021
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    https://doi.org/10.5194/cp-202...
    Preprint . 2021 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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    Climate of the Past (CP); Climate of the Past
    Article . Preprint . 2021
    License: CC BY
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Han, Z; Zhang, Q; Li, Q; Feng, R; +25 Authors

    Abstract. The mid-Pliocene (∼3 Ma) is one of the most recent warm periods with high CO2 concentrations in the atmosphere and resulting high temperatures, and it is often cited as an analog for near-term future climate change. Here, we apply a moisture budget analysis to investigate the response of the large-scale hydrological cycle at low latitudes within a 13-model ensemble from the Pliocene Model Intercomparison Project Phase 2 (PlioMIP2). The results show that increased atmospheric moisture content within the mid-Pliocene ensemble (due to the thermodynamic effect) results in wetter conditions over the deep tropics, i.e., the Pacific intertropical convergence zone (ITCZ) and the Maritime Continent, and drier conditions over the subtropics. Note that the dynamic effect plays a more important role than the thermodynamic effect in regional precipitation minus evaporation (PmE) changes (i.e., northward ITCZ shift and wetter northern Indian Ocean). The thermodynamic effect is offset to some extent by a dynamic effect involving a northward shift of the Hadley circulation that dries the deep tropics and moistens the subtropics in the Northern Hemisphere (i.e., the subtropical Pacific). From the perspective of Earth's energy budget, the enhanced southward cross-equatorial atmospheric transport (0.22 PW), induced by the hemispheric asymmetries of the atmospheric energy, favors an approximately 1∘ northward shift of the ITCZ. The shift of the ITCZ reorganizes atmospheric circulation, favoring a northward shift of the Hadley circulation. In addition, the Walker circulation consistently shifts westward within PlioMIP2 models, leading to wetter conditions over the northern Indian Ocean. The PlioMIP2 ensemble highlights that an imbalance of interhemispheric atmospheric energy during the mid-Pliocene could have led to changes in the dynamic effect, offsetting the thermodynamic effect and, hence, altering mid-Pliocene hydroclimate. International audience

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Norwegian Open Resea...arrow_drop_down
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    NORCE Research Archive
    Article . 2021 . Peer-reviewed
    Copernicus Publications
    Other literature type . 2021
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: A. M. Haywood; J. C. Tindall; H. J. Dowsett; A. M. Dolan; +32 Authors

    The Pliocene epoch has great potential to improve our understanding of the long-term climatic and environmental consequences of an atmospheric CO2 concentration near ~ 400 parts per million by volume. Here we present the large-scale features of Pliocene climate as simulated by a new ensemble of climate models of varying complexity and spatial resolution based on new reconstructions of boundary conditions (the Pliocene Model Intercomparison Project Phase 2; PlioMIP2). As a global annual average, modelled surface air temperatures increase by between 1.7 and 5.2 °C relative to the pre-industrial era with a multi-model mean value of 3.2 °C. Annual mean total precipitation rates increase by 7 % (range: 2 %-13 %). On average, surface air temperature (SAT) increases by 4.3 °C over land and 2.8 ° C over the oceans. There is a clear pattern of polar amplification with warming polewards of 60° N and 60° S exceeding the global mean warming by a factor of 2.3. In the Atlantic and Pacific oceans, meridional temperature gradients are reduced, while tropical zonal gradients remain largely unchanged. There is a statistically significant relationship between a model's climate response associated with a doubling in CO2 (equilibrium climate sensitivity; ECS) and its simulated Pliocene surface temperature response. The mean ensemble Earth system response to a doubling of CO2 (including ice sheet feedbacks) is 67 % greater than ECS; this is larger than the increase of 47 % obtained from the PlioMIP1 ensemble. Proxy-derived estimates of Pliocene sea surface temperatures are used to assess model estimates of ECS and give an ECS range of 2.6-4.8 °C. This result is in general accord with the ECS range presented by previous Intergovernmental Panel on Climate Change (IPCC) Assessment Reports. International audience

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Mémoires en Sciences...arrow_drop_down
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    Climate of the Past (CP)
    Article . 2020 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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    DOAJ
    Article . 2020
    Data sources: DOAJ
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    NORCE Research Archive
    Article . 2020 . Peer-reviewed
    Copernicus Publications
    Other literature type . 2020
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Mémoires en Sciences...arrow_drop_down
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      Climate of the Past (CP)
      Article . 2020 . Peer-reviewed
      License: CC BY
      Data sources: Crossref
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      DOAJ
      Article . 2020
      Data sources: DOAJ
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      NORCE Research Archive
      Article . 2020 . Peer-reviewed
      Copernicus Publications
      Other literature type . 2020
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Zhang, Zhongshi; Li, Xiangyu; Guo, Chuncheng; Otterå, Odd Helge; +28 Authors

    In the Pliocene Model Intercomparison Project Phase 2 (PlioMIP2), coupled climate models have been used to simulate an interglacial climate during the mid-Piacenzian warm period (mPWP; 3.264 to 3.025 Ma). Here, we compare the Atlantic Meridional Overturning Circulation (AMOC), poleward ocean heat transport and sea surface warming in the Atlantic simulated with these models. In PlioMIP2, all models simulate an intensified mid-Pliocene AMOC. However, there is no consistent response in the simulated Atlantic ocean heat transport nor in the depth of the Atlantic overturning cell. The models show a large spread in the simulated AMOC maximum, the Atlantic ocean heat transport and the surface warming in the North Atlantic. Although a few models simulate a surface warming of ∼ 8–12 ∘C in the North Atlantic, similar to the reconstruction from Pliocene Research, Interpretation and Synoptic Mapping (PRISM) version 4, most models appear to underestimate this warming. The large model spread and model–data discrepancies in the PlioMIP2 ensemble do not support the hypothesis that an intensification of the AMOC, together with an increase in northward ocean heat transport, is the dominant mechanism for the mid-Pliocene warm climate over the North Atlantic. International audience

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    Climate of the Past (CP); Climate of the Past
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    Climate of the Past (CP); Climate of the Past
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    https://doi.org/10.5194/cp-202...
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      Climate of the Past (CP); Climate of the Past
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      Climate of the Past (CP); Climate of the Past
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      https://doi.org/10.5194/cp-202...
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      Climate of the Past (CP)
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    Authors: Gliwa, J.; Ghaderi, A.; Leda, L.; Schobben, M.; +10 Authors

    Abstract. The Permian–Triassic boundary section in the Aras Valley in NW Iran is investigated with respect to carbonate microfacies, biostratigraphy (particularly conodonts, nautiloids, and ammonoids), chemostratigraphy (carbon isotopes), and environmental setting. Correlation of the data allows the establishment of a high-resolution stratigraphy based on conodonts (with four Wuchiapingian, 10 Changhsingian, and three Griesbachian zones), ammonoids (with nine Changhsingian zones), and carbon isotopes; it forms the base for the reconstruction of the environmental changes before and after the end-Permian extinction event at the studied locality. In the Aras Valley section, there is no evidence for the development of anoxic conditions, associated with the end-Permian mass extinction.

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    Authors: Laurent A. F. Frantz; James Haile; Audrey T. Lin; Amelie Scheu; +96 Authors

    Archaeological evidence indicates that pig domestication had begun by ∼10,500 y before the present (BP) in the Near East, and mitochondrial DNA (mtDNA) suggests that pigs arrived in Europe alongside farmers ∼8,500 y BP. A few thousand years after the introduction of Near Eastern pigs into Europe, however, their characteristic mtDNA signature disappeared and was replaced by haplotypes associated with European wild boars. This turnover could be accounted for by substantial gene flow from local Euro-pean wild boars, although it is also possible that European wild boars were domesticated independently without any genetic contribution from the Near East. To test these hypotheses, we obtained mtDNA sequences from 2,099 modern and ancient pig samples and 63 nuclear ancient genomes from Near Eastern and European pigs. Our analyses revealed that European domestic pigs dating from 7,100 to 6,000 y BP possessed both Near Eastern and European nuclear ancestry, while later pigs possessed no more than 4% Near Eastern ancestry, indicating that gene flow from European wild boars resulted in a near-complete disappearance of Near East ancestry. In addition, we demonstrate that a variant at a locus encoding black coat color likely originated in the Near East and persisted in European pigs. Altogether, our results indicate that while pigs were not independently domesticated in Europe, the vast majority of human-mediated selection over the past 5,000 y focused on the genomic fraction derived from the European wild boars, and not on the fraction that was selected by early Neolithic farmers over the first 2,500 y of the domestication process. domestication | evolution | gene flow | Neolithic International audience

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    UCL Discovery
    Article . 2019
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    Europe PubMed Central
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    UNC Dataverse
    Article . 2019
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    https://doi.org/10.17169/refub...
    Other literature type . 2019
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    Authors: G.-J. A. Brummer; G.-J. A. Brummer; B. Metcalfe; B. Metcalfe; +6 Authors

    Changeover from a glacial to an interglacial climate is considered as transitional between two stable modes. Palaeoceanographic reconstructions using the polar foraminifera Neogloboquadrina pachyderma highlight the retreat of the Polar Front during the last deglaciation in terms of both its decreasing abundance and stable oxygen isotope values (δ 18 O) in sediment cores. While conventional isotope analysis of pooled N. pachyderma and G. bulloides shells shows a warming trend concurrent with the retreating ice, new single-shell measurements reveal that this trend is composed of two isotopically different populations that are morphologically indistinguishable. Using modern time series as analogues for interpreting downcore data, glacial productivity in the mid-North Atlantic appears limited to a single maximum in late summer, followed by the melting of drifting icebergs and winter sea ice. Despite collapsing ice sheets and global warming during the deglaciation, a second "warm" population of N. pachyderma appears in a bimodal seasonal succession, separated by the subpolar G. bulloides. This represents a shift in the timing of the main plankton bloom from late to early summer in a "deglacial" intermediate mode that persisted from the glacial maximum until the start of the Holocene. When seawater temperatures exceeded the threshold values, first the "cold" (glacial) then the "warm" (deglacial) populations of N. pachyderma disappeared , whilst G. bulloides with a greater tolerance to higher temperatures persisted throughout the Holocene to the present day in the midlatitude North Atlantic. Single-specimen δ 18 O of polar N. pachyderma reveals a steeper rate of ocean warming during the last deglaciation than appears from conventional pooled δ 18 O average values. International audience

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    Climate of the Past (CP)
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    Climate of the Past (CP)
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    DOAJ
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    Climate of the Past
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    https://doi.org/10.5194/cp-201...
    Preprint . 2019
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    Climate of the Past (CP)
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      https://doi.org/10.5194/cp-201...
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      Climate of the Past (CP)
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    Authors: Houssaye Michienzi, Ingrid; Vagnon, Emmanuelle;

    International audience; The Datini Archive in Prato, Italy, a remarkable collection of a late fourteenth–early fifteenth century merchant’s business correspondence, includes a number of orders for charts from Majorca, one of the major chart-making centres in the Mediterranean in the Middle Ages. The letters give information on prices, the length of time it took to make a chart, and its destination. The archive also contains unpublished information on how the charts were packed and transported. From these sources we conclude that the charts appear to have served not only to prepare business trips, but also to embody the memory of these trips.

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    Imago Mundi
    Article . 2018 . Peer-reviewed
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    Authors: Andreia C. Lino; Van Duc Dang; Vicky Lampropoulou; Anna Welle; +26 Authors

    Summary B lymphocytes can suppress immunity through interleukin (IL)-10 production in infectious, autoimmune, and malignant diseases. Here, we have identified a natural plasma cell subset that distinctively expresses the inhibitory receptor LAG-3 and mediates this function in vivo. These plasma cells also express the inhibitory receptors CD200, PD-L1, and PD-L2. They develop from various B cell subsets in a B cell receptor (BCR)-dependent manner independently of microbiota in naive mice. After challenge they upregulate IL-10 expression via a Toll-like receptor-driven mechanism within hours and without proliferating. This function is associated with a unique transcriptome and epigenome, including the lowest amount of DNA methylation at the Il10 locus compared to other B cell subsets. Their augmented accumulation in naive mutant mice with increased BCR signaling correlates with the inhibition of memory T cell formation and vaccine efficacy after challenge. These natural regulatory plasma cells may be of broad relevance for disease intervention. Plasma cells secrete antibodies and play a key role in host defense against infection. Lino et al. identify a novel subset of natural regulatory plasma cells characterized by the expression of LAG-3 that develops at steady state independently of microbiota, and respond to innate stimulation by producing immunosuppressive IL-10. Highlights • LAG-3 expression identifies natural regulatory plasma cells • LAG-3+CD138hi plasma cells express IL-10 within hours of stimulation • LAG-3+CD138hi plasma cells have a unique epigenome poised to express IL-10 • LAG-3+CD138hi plasma cells develop via an antigen-specific mechanism Graphical Abstract

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    MPG.PuRe
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    Immunity
    Other literature type . Article . 2018 . Peer-reviewed
    License: Elsevier TDM
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    ProdInra
    Article . 2018
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Nature Reviews Immunology
    Article . 2018 . Peer-reviewed
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Europe PubMed Centra...arrow_drop_down
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      Article . 2018
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      Immunity
      Other literature type . Article . 2018 . Peer-reviewed
      License: Elsevier TDM
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      Immunity
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      ProdInra
      Article . 2018
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      Nature Reviews Immunology
      Article . 2018 . Peer-reviewed
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Karène Sanchez Summerer; Philippe Bourmaud; Séverine Gabry-Thienpont; Marie Levant; +1 Authors

    How was missionary knowledge received and interpreted by scholars and church historians in Europe and Russia? Many late nineteenth and early twentieth-century academics utilised knowledge production from Christian missions, notably by way of scholarly Orientalism. However, the history of this knowledge is also a history of representations: while missionary knowledge helped showcase the cultural and religious traditions of Eastern Christianity, what were the underlying motives and especially the consequences? This article examines the formulation and circulation of Eastern Christian knowledge on either side of the Mediterranean, especially on the basis of Catholic missionary archives and academic productions, the study of which is sometimes rooted in non-Anglophone academic traditions. The aim is to shed light on how knowledge relating to Eastern Christianity was assimilated in Europe, as well as the role missions played in this process, especially from the last third of the nineteenth century, when the institutions and instruments for the circulation of knowledge emerged. Another objective is to address the circulations and transformations of this knowledge on either side of the Mediterranean: collected and developed in major European libraries and universities, it was integrated by the governance structures of churches, but quite often also returned to the space it originated from, where it was reappropriated and gave rise to patrimonial processes, notably alongside the sometimes tragic experiences of certain communities during the end of the Ottoman Empire and the establishment of new states. Christian missions, at the intersection of East and West, were at the heart of this dynamic . International audience

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    Contemporary Levant
    Article
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    Contemporary Levant
    Article . 2021 . Peer-reviewed
    License: CC BY
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    Authors: Sathyanadh, Anusha; Monteil, Guillaume; Scholze, Marko; Klosterhalfen, Anne; +40 Authors

    The mid-Pliocene warm period (3.264–3.025 Ma) is the most recent geological period during which atmospheric CO2 levels were similar to recent historical values (∼400 ppm). Several proxy reconstructions for the mid-Pliocene show highly reduced zonal sea surface temperature (SST) gradients in the tropical Pacific Ocean, indicating an El Niño-like mean state. However, past modelling studies do not show these highly reduced gradients. Efforts to understand mid-Pliocene climate dynamics have led to the Pliocene Model Intercomparison Project (PlioMIP). Results from the first phase (PlioMIP1) showed clear El Niño variability (albeit significantly reduced) and did not show the greatly reduced time-mean zonal SST gradient suggested by some of the proxies. In this work, we study El Niño–Southern Oscillation (ENSO) variability in the PlioMIP2 ensemble, which consists of additional global coupled climate models and updated boundary conditions compared to PlioMIP1. We quantify ENSO amplitude, period, spatial structure and “flavour”, as well as the tropical Pacific annual mean state in mid-Pliocene and pre-industrial simulations. Results show a reduced ENSO amplitude in the model-ensemble mean (−24 %) with respect to the pre-industrial, with 15 out of 17 individual models showing such a reduction. Furthermore, the spectral power of this variability considerably decreases in the 3–4-year band. The spatial structure of the dominant empirical orthogonal function shows no particular change in the patterns of tropical Pacific variability in the model-ensemble mean, compared to the pre-industrial. Although the time-mean zonal SST gradient in the equatorial Pacific decreases for 14 out of 17 models (0.2 ∘C reduction in the ensemble mean), there does not seem to be a correlation with the decrease in ENSO amplitude. The models showing the most “El Niño-like” mean state changes show a similar ENSO amplitude to that in the pre-industrial reference, while models showing more “La Niña-like” mean state changes generally show a large reduction in ENSO variability. The PlioMIP2 results show a reasonable agreement with both time-mean proxies indicating a reduced zonal SST gradient and reconstructions indicating a reduced, or similar, ENSO variability. International audience

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    DOAJ
    Article . 2021
    Data sources: DOAJ
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    Climate of the Past (CP)
    Other literature type . 2021
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    https://doi.org/10.5194/cp-202...
    Preprint . 2021 . Peer-reviewed
    License: CC BY
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    Climate of the Past (CP); Climate of the Past
    Article . Preprint . 2021
    License: CC BY
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Han, Z; Zhang, Q; Li, Q; Feng, R; +25 Authors

    Abstract. The mid-Pliocene (∼3 Ma) is one of the most recent warm periods with high CO2 concentrations in the atmosphere and resulting high temperatures, and it is often cited as an analog for near-term future climate change. Here, we apply a moisture budget analysis to investigate the response of the large-scale hydrological cycle at low latitudes within a 13-model ensemble from the Pliocene Model Intercomparison Project Phase 2 (PlioMIP2). The results show that increased atmospheric moisture content within the mid-Pliocene ensemble (due to the thermodynamic effect) results in wetter conditions over the deep tropics, i.e., the Pacific intertropical convergence zone (ITCZ) and the Maritime Continent, and drier conditions over the subtropics. Note that the dynamic effect plays a more important role than the thermodynamic effect in regional precipitation minus evaporation (PmE) changes (i.e., northward ITCZ shift and wetter northern Indian Ocean). The thermodynamic effect is offset to some extent by a dynamic effect involving a northward shift of the Hadley circulation that dries the deep tropics and moistens the subtropics in the Northern Hemisphere (i.e., the subtropical Pacific). From the perspective of Earth's energy budget, the enhanced southward cross-equatorial atmospheric transport (0.22 PW), induced by the hemispheric asymmetries of the atmospheric energy, favors an approximately 1∘ northward shift of the ITCZ. The shift of the ITCZ reorganizes atmospheric circulation, favoring a northward shift of the Hadley circulation. In addition, the Walker circulation consistently shifts westward within PlioMIP2 models, leading to wetter conditions over the northern Indian Ocean. The PlioMIP2 ensemble highlights that an imbalance of interhemispheric atmospheric energy during the mid-Pliocene could have led to changes in the dynamic effect, offsetting the thermodynamic effect and, hence, altering mid-Pliocene hydroclimate. International audience

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    NORCE Research Archive
    Article . 2021 . Peer-reviewed
    Copernicus Publications
    Other literature type . 2021
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    Authors: A. M. Haywood; J. C. Tindall; H. J. Dowsett; A. M. Dolan; +32 Authors

    The Pliocene epoch has great potential to improve our understanding of the long-term climatic and environmental consequences of an atmospheric CO2 concentration near ~ 400 parts per million by volume. Here we present the large-scale features of Pliocene climate as simulated by a new ensemble of climate models of varying complexity and spatial resolution based on new reconstructions of boundary conditions (the Pliocene Model Intercomparison Project Phase 2; PlioMIP2). As a global annual average, modelled surface air temperatures increase by between 1.7 and 5.2 °C relative to the pre-industrial era with a multi-model mean value of 3.2 °C. Annual mean total precipitation rates increase by 7 % (range: 2 %-13 %). On average, surface air temperature (SAT) increases by 4.3 °C over land and 2.8 ° C over the oceans. There is a clear pattern of polar amplification with warming polewards of 60° N and 60° S exceeding the global mean warming by a factor of 2.3. In the Atlantic and Pacific oceans, meridional temperature gradients are reduced, while tropical zonal gradients remain largely unchanged. There is a statistically significant relationship between a model's climate response associated with a doubling in CO2 (equilibrium climate sensitivity; ECS) and its simulated Pliocene surface temperature response. The mean ensemble Earth system response to a doubling of CO2 (including ice sheet feedbacks) is 67 % greater than ECS; this is larger than the increase of 47 % obtained from the PlioMIP1 ensemble. Proxy-derived estimates of Pliocene sea surface temperatures are used to assess model estimates of ECS and give an ECS range of 2.6-4.8 °C. This result is in general accord with the ECS range presented by previous Intergovernmental Panel on Climate Change (IPCC) Assessment Reports. International audience

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    Climate of the Past (CP)
    Article . 2020 . Peer-reviewed
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    NORCE Research Archive
    Article . 2020 . Peer-reviewed
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      Climate of the Past (CP)
      Article . 2020 . Peer-reviewed
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      NORCE Research Archive
      Article . 2020 . Peer-reviewed
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    Authors: Zhang, Zhongshi; Li, Xiangyu; Guo, Chuncheng; Otterå, Odd Helge; +28 Authors

    In the Pliocene Model Intercomparison Project Phase 2 (PlioMIP2), coupled climate models have been used to simulate an interglacial climate during the mid-Piacenzian warm period (mPWP; 3.264 to 3.025 Ma). Here, we compare the Atlantic Meridional Overturning Circulation (AMOC), poleward ocean heat transport and sea surface warming in the Atlantic simulated with these models. In PlioMIP2, all models simulate an intensified mid-Pliocene AMOC. However, there is no consistent response in the simulated Atlantic ocean heat transport nor in the depth of the Atlantic overturning cell. The models show a large spread in the simulated AMOC maximum, the Atlantic ocean heat transport and the surface warming in the North Atlantic. Although a few models simulate a surface warming of ∼ 8–12 ∘C in the North Atlantic, similar to the reconstruction from Pliocene Research, Interpretation and Synoptic Mapping (PRISM) version 4, most models appear to underestimate this warming. The large model spread and model–data discrepancies in the PlioMIP2 ensemble do not support the hypothesis that an intensification of the AMOC, together with an increase in northward ocean heat transport, is the dominant mechanism for the mid-Pliocene warm climate over the North Atlantic. International audience

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    NORCE Research Archive
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    Climate of the Past (CP); Climate of the Past
    Article . 2021 . Peer-reviewed
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    Climate of the Past (CP); Climate of the Past
    Article . Preprint . 2021
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    https://doi.org/10.5194/cp-202...
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    Climate of the Past (CP)
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      Climate of the Past (CP); Climate of the Past
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      Climate of the Past (CP); Climate of the Past
      Article . Preprint . 2021
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      https://doi.org/10.5194/cp-202...
      Preprint . 2020 . Peer-reviewed
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      Climate of the Past (CP)
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    Authors: Gliwa, J.; Ghaderi, A.; Leda, L.; Schobben, M.; +10 Authors

    Abstract. The Permian–Triassic boundary section in the Aras Valley in NW Iran is investigated with respect to carbonate microfacies, biostratigraphy (particularly conodonts, nautiloids, and ammonoids), chemostratigraphy (carbon isotopes), and environmental setting. Correlation of the data allows the establishment of a high-resolution stratigraphy based on conodonts (with four Wuchiapingian, 10 Changhsingian, and three Griesbachian zones), ammonoids (with nine Changhsingian zones), and carbon isotopes; it forms the base for the reconstruction of the environmental changes before and after the end-Permian extinction event at the studied locality. In the Aras Valley section, there is no evidence for the development of anoxic conditions, associated with the end-Permian mass extinction.

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    Article . 2020 . Peer-reviewed
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    Authors: Laurent A. F. Frantz; James Haile; Audrey T. Lin; Amelie Scheu; +96 Authors

    Archaeological evidence indicates that pig domestication had begun by ∼10,500 y before the present (BP) in the Near East, and mitochondrial DNA (mtDNA) suggests that pigs arrived in Europe alongside farmers ∼8,500 y BP. A few thousand years after the introduction of Near Eastern pigs into Europe, however, their characteristic mtDNA signature disappeared and was replaced by haplotypes associated with European wild boars. This turnover could be accounted for by substantial gene flow from local Euro-pean wild boars, although it is also possible that European wild boars were domesticated independently without any genetic contribution from the Near East. To test these hypotheses, we obtained mtDNA sequences from 2,099 modern and ancient pig samples and 63 nuclear ancient genomes from Near Eastern and European pigs. Our analyses revealed that European domestic pigs dating from 7,100 to 6,000 y BP possessed both Near Eastern and European nuclear ancestry, while later pigs possessed no more than 4% Near Eastern ancestry, indicating that gene flow from European wild boars resulted in a near-complete disappearance of Near East ancestry. In addition, we demonstrate that a variant at a locus encoding black coat color likely originated in the Near East and persisted in European pigs. Altogether, our results indicate that while pigs were not independently domesticated in Europe, the vast majority of human-mediated selection over the past 5,000 y focused on the genomic fraction derived from the European wild boars, and not on the fraction that was selected by early Neolithic farmers over the first 2,500 y of the domestication process. domestication | evolution | gene flow | Neolithic International audience

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    NARCIS; Research@WUR
    Article . 2019
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    Europe PubMed Central
    Other literature type . 2020
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    UNC Dataverse
    Article . 2019
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    https://doi.org/10.17169/refub...
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    Authors: G.-J. A. Brummer; G.-J. A. Brummer; B. Metcalfe; B. Metcalfe; +6 Authors

    Changeover from a glacial to an interglacial climate is considered as transitional between two stable modes. Palaeoceanographic reconstructions using the polar foraminifera Neogloboquadrina pachyderma highlight the retreat of the Polar Front during the last deglaciation in terms of both its decreasing abundance and stable oxygen isotope values (δ 18 O) in sediment cores. While conventional isotope analysis of pooled N. pachyderma and G. bulloides shells shows a warming trend concurrent with the retreating ice, new single-shell measurements reveal that this trend is composed of two isotopically different populations that are morphologically indistinguishable. Using modern time series as analogues for interpreting downcore data, glacial productivity in the mid-North Atlantic appears limited to a single maximum in late summer, followed by the melting of drifting icebergs and winter sea ice. Despite collapsing ice sheets and global warming during the deglaciation, a second "warm" population of N. pachyderma appears in a bimodal seasonal succession, separated by the subpolar G. bulloides. This represents a shift in the timing of the main plankton bloom from late to early summer in a "deglacial" intermediate mode that persisted from the glacial maximum until the start of the Holocene. When seawater temperatures exceeded the threshold values, first the "cold" (glacial) then the "warm" (deglacial) populations of N. pachyderma disappeared , whilst G. bulloides with a greater tolerance to higher temperatures persisted throughout the Holocene to the present day in the midlatitude North Atlantic. Single-specimen δ 18 O of polar N. pachyderma reveals a steeper rate of ocean warming during the last deglaciation than appears from conventional pooled δ 18 O average values. International audience

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    Climate of the Past (CP)
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    https://doi.org/10.5194/cp-201...
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    Climate of the Past (CP)
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      https://doi.org/10.5194/cp-201...
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      Climate of the Past (CP)
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    Authors: Houssaye Michienzi, Ingrid; Vagnon, Emmanuelle;

    International audience; The Datini Archive in Prato, Italy, a remarkable collection of a late fourteenth–early fifteenth century merchant’s business correspondence, includes a number of orders for charts from Majorca, one of the major chart-making centres in the Mediterranean in the Middle Ages. The letters give information on prices, the length of time it took to make a chart, and its destination. The archive also contains unpublished information on how the charts were packed and transported. From these sources we conclude that the charts appear to have served not only to prepare business trips, but also to embody the memory of these trips.

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    Imago Mundi
    Article . 2018 . Peer-reviewed
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    Authors: Andreia C. Lino; Van Duc Dang; Vicky Lampropoulou; Anna Welle; +26 Authors

    Summary B lymphocytes can suppress immunity through interleukin (IL)-10 production in infectious, autoimmune, and malignant diseases. Here, we have identified a natural plasma cell subset that distinctively expresses the inhibitory receptor LAG-3 and mediates this function in vivo. These plasma cells also express the inhibitory receptors CD200, PD-L1, and PD-L2. They develop from various B cell subsets in a B cell receptor (BCR)-dependent manner independently of microbiota in naive mice. After challenge they upregulate IL-10 expression via a Toll-like receptor-driven mechanism within hours and without proliferating. This function is associated with a unique transcriptome and epigenome, including the lowest amount of DNA methylation at the Il10 locus compared to other B cell subsets. Their augmented accumulation in naive mutant mice with increased BCR signaling correlates with the inhibition of memory T cell formation and vaccine efficacy after challenge. These natural regulatory plasma cells may be of broad relevance for disease intervention. Plasma cells secrete antibodies and play a key role in host defense against infection. Lino et al. identify a novel subset of natural regulatory plasma cells characterized by the expression of LAG-3 that develops at steady state independently of microbiota, and respond to innate stimulation by producing immunosuppressive IL-10. Highlights • LAG-3 expression identifies natural regulatory plasma cells • LAG-3+CD138hi plasma cells express IL-10 within hours of stimulation • LAG-3+CD138hi plasma cells have a unique epigenome poised to express IL-10 • LAG-3+CD138hi plasma cells develop via an antigen-specific mechanism Graphical Abstract

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    MPG.PuRe
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    Immunity
    Other literature type . Article . 2018 . Peer-reviewed
    License: Elsevier TDM
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    Immunity
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    Nature Reviews Immunology
    Article . 2018 . Peer-reviewed
    License: Springer TDM
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      Immunity
      Other literature type . Article . 2018 . Peer-reviewed
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      Immunity
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      Nature Reviews Immunology
      Article . 2018 . Peer-reviewed
      License: Springer TDM
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