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24 Research products, page 2 of 3

  • Digital Humanities and Cultural Heritage
  • Research software
  • Open Source

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  • Research software . 2019
    Open Source Python
    Authors: 
    Salathé, Marcel; Müller, Martin;
    Publisher: bio.tools

    Tracking Health Trends Using Public Social Media Data and Crowdsourcing.

  • Research software . 2019
    Open Source
    Authors: 
    Zhang, Xiaoyan; Wang, Ying;
    Publisher: bio.tools

    Knowledge database for the automated curation and multidimensional analysis of molecular signatures in gastrointestinal (GI) cancer.

  • Research software . 2019
    Open Source Python
    Authors: 
    Lever, Jake;
    Publisher: bio.tools

    Literature-mined resource for drivers, oncogenes and tumor suppressors in cancer.

  • Research software . 2019
    Open Source Java
    Authors: 
    Dong, Wang;
    Publisher: bio.tools

    Tool for RNA–RNA interaction extraction from the literature.

  • Research software . 2019
    Open Source R
    Authors: 
    Davis, Sean;
    Publisher: bio.tools

    Package that facilitates access to extensive metadata in computable form covering the Bioconductor package ecosystem, facilitating downstream applications such as custom reporting, data and text mining of Bioconductor package text descriptions, graph analytics over pack...

  • Research software . 2019
    Open Source
    Authors: 
    Wu, Canglin;
    Publisher: bio.tools

    Restructured version of Gene Expression Omnibus (GEO) that provides a user friendly interface for curating GEO database

  • Research software . 2019
    Open Source PHP
    Authors: 
    Bossy, Robert;
    Publisher: bio.tools

    Text mining tool for extracting information about microbial biodiversity in food.

  • Research software . 2019
    Open Source Python
    Authors: 
    BioTM;
    Publisher: bio.tools

    Model to detect and classify relations in text, representing each entity of domain-specific ontologies as the sequence of its ancestors in the ontology. BO-LSTM is implemented as a recurrent neural network with long short-term memory units and using open biomedical onto...

  • Research software . 2018
    Open Source Java
    Authors: 
    Lange, Matthias;
    Publisher: bio.tools

    A machine learning approach for optimizing data searching and filtering from life-science databases. It is integrated in the LAILAPS search engine.

  • Research software . 2018
    Open Source
    Authors: 
    Jensen, Lars Juhl;
    Publisher: bio.tools

    ORGANISMS is a weekly updated web resource that facilitates taxonomy-aware search and retrieval of articles. To this end, the the resource performs named entity recognition of terms from the NCBI Taxonomy on PubMed abstracts. The resource further provides download files...